NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 2,808.3 |
| Mean read quality | 10.0 |
| Median read length | 689.0 |
| Median read quality | 11.0 |
| Number of reads | 1,195,012.0 |
| Read length N50 | 10,044.0 |
| STDEV read length | 4,921.2 |
| Total bases | 3,355,935,640.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1195012 (100.0%) 3355.9Mb |
| >Q7 | 1192278 (99.8%) 3355.2Mb |
| >Q10 | 812193 (68.0%) 2464.5Mb |
| >Q12 | 335386 (28.1%) 878.1Mb |
| >Q15 | 13473 (1.1%) 4.4Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 25.6 (117) |
| 2 | 25.0 (95) |
| 3 | 25.0 (104) |
| 4 | 24.8 (101) |
| 5 | 23.7 (97) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 83885 (9.0) |
| 2 | 75112 (8.0) |
| 3 | 73961 (9.0) |
| 4 | 71260 (9.0) |
| 5 | 69328 (9.3) |