NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,223.3 |
| Mean read quality | 11.2 |
| Median read length | 787.0 |
| Median read quality | 12.5 |
| Number of reads | 2,501,439.0 |
| Read length N50 | 2,017.0 |
| STDEV read length | 1,382.4 |
| Total bases | 3,060,011,379.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 2501436 (100.0%) 3060.0Mb |
| >Q7 | 2497720 (99.9%) 3059.0Mb |
| >Q10 | 2061884 (82.4%) 2515.2Mb |
| >Q12 | 1460918 (58.4%) 1801.7Mb |
| >Q15 | 325132 (13.0%) 342.9Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 29.2 (97) |
| 2 | 28.1 (96) |
| 3 | 28.0 (193) |
| 4 | 27.5 (142) |
| 5 | 27.0 (163) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 58725 (8.6) |
| 2 | 56404 (14.5) |
| 3 | 54830 (8.8) |
| 4 | 53525 (7.3) |
| 5 | 51753 (8.5) |