NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,098.0 |
| Mean read quality |
30.0 |
| Median read length |
1,048.0 |
| Median read quality |
30.0 |
| Number of reads |
320,358.0 |
| Read length N50 |
1,289.0 |
| STDEV read length |
506.0 |
| Total bases |
351,759,013.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
320358 (100.0%) 351.8Mb |
| >Q7 |
320358 (100.0%) 351.8Mb |
| >Q10 |
320358 (100.0%) 351.8Mb |
| >Q12 |
320358 (100.0%) 351.8Mb |
| >Q15 |
320358 (100.0%) 351.8Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
30.0 (482) |
| 2 |
30.0 (986) |
| 3 |
30.0 (334) |
| 4 |
30.0 (1665) |
| 5 |
30.0 (187) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
4897 (30.0) |
| 2 |
4808 (30.0) |
| 3 |
4169 (30.0) |
| 4 |
4149 (30.0) |
| 5 |
3959 (30.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths