NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
4,246.6 |
| Mean read quality |
30.0 |
| Median read length |
4,198.0 |
| Median read quality |
30.0 |
| Number of reads |
34,622.0 |
| Read length N50 |
4,605.0 |
| STDEV read length |
1,359.0 |
| Total bases |
147,025,160.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
34622 (100.0%) 147.0Mb |
| >Q7 |
34622 (100.0%) 147.0Mb |
| >Q10 |
34622 (100.0%) 147.0Mb |
| >Q12 |
34622 (100.0%) 147.0Mb |
| >Q15 |
34622 (100.0%) 147.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
30.0 (5894) |
| 2 |
30.0 (5737) |
| 3 |
30.0 (2808) |
| 4 |
30.0 (3893) |
| 5 |
30.0 (7084) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
10968 (30.0) |
| 2 |
10714 (30.0) |
| 3 |
10548 (30.0) |
| 4 |
9778 (30.0) |
| 5 |
9604 (30.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths