NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
4,363.8 |
| Mean read quality |
30.0 |
| Median read length |
4,304.0 |
| Median read quality |
30.0 |
| Number of reads |
32,424.0 |
| Read length N50 |
5,337.0 |
| STDEV read length |
2,192.2 |
| Total bases |
141,491,897.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
32424 (100.0%) 141.5Mb |
| >Q7 |
32424 (100.0%) 141.5Mb |
| >Q10 |
32424 (100.0%) 141.5Mb |
| >Q12 |
32424 (100.0%) 141.5Mb |
| >Q15 |
32424 (100.0%) 141.5Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
30.0 (220) |
| 2 |
30.0 (3267) |
| 3 |
30.0 (4592) |
| 4 |
30.0 (5107) |
| 5 |
30.0 (6126) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
34729 (30.0) |
| 2 |
32989 (30.0) |
| 3 |
31842 (30.0) |
| 4 |
27304 (30.0) |
| 5 |
22996 (30.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths