NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
10,975.7 |
| Mean read quality |
30.0 |
| Median read length |
7,919.5 |
| Median read quality |
30.0 |
| Number of reads |
103,466.0 |
| Read length N50 |
18,530.0 |
| STDEV read length |
10,859.0 |
| Total bases |
1,135,611,402.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
103466 (100.0%) 1135.6Mb |
| >Q7 |
103466 (100.0%) 1135.6Mb |
| >Q10 |
103466 (100.0%) 1135.6Mb |
| >Q12 |
103466 (100.0%) 1135.6Mb |
| >Q15 |
103466 (100.0%) 1135.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
30.0 (393) |
| 2 |
30.0 (7483) |
| 3 |
30.0 (933) |
| 4 |
30.0 (412) |
| 5 |
30.0 (3716) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
116461 (30.0) |
| 2 |
97760 (30.0) |
| 3 |
96551 (30.0) |
| 4 |
96358 (30.0) |
| 5 |
95336 (30.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths