NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 6,000.1 |
| Mean read quality | 11.6 |
| Median read length | 5,321.0 |
| Median read quality | 12.9 |
| Number of reads | 1,081,021.0 |
| Read length N50 | 7,337.0 |
| STDEV read length | 3,334.0 |
| Total bases | 6,486,243,475.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1081021 (100.0%) 6486.2Mb |
| >Q7 | 1081021 (100.0%) 6486.2Mb |
| >Q10 | 932684 (86.3%) 5588.7Mb |
| >Q12 | 694600 (64.3%) 4167.3Mb |
| >Q15 | 140291 (13.0%) 797.9Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 21.0 (2279) |
| 2 | 20.6 (2116) |
| 3 | 20.5 (2712) |
| 4 | 20.3 (2567) |
| 5 | 20.3 (3427) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 51539 (8.4) |
| 2 | 47811 (9.3) |
| 3 | 46896 (9.3) |
| 4 | 46148 (15.6) |
| 5 | 44670 (11.7) |