NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
8,045.7 |
| Mean read quality |
9.8 |
| Median read length |
7,715.0 |
| Median read quality |
10.8 |
| Number of reads |
963,799.0 |
| Read length N50 |
8,481.0 |
| STDEV read length |
2,804.3 |
| Total bases |
7,754,463,814.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
963799 (100.0%) 7754.5Mb |
| >Q7 |
963798 (100.0%) 7754.5Mb |
| >Q10 |
630820 (65.5%) 5066.3Mb |
| >Q12 |
232284 (24.1%) 1858.5Mb |
| >Q15 |
227 (0.0%) 1.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
16.3 (2365) |
| 2 |
16.2 (2198) |
| 3 |
16.0 (7419) |
| 4 |
15.9 (10434) |
| 5 |
15.9 (8259) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
42840 (11.4) |
| 2 |
41040 (8.0) |
| 3 |
39975 (8.8) |
| 4 |
39298 (8.4) |
| 5 |
39193 (12.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot