NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 7,372.7 |
| Mean read quality | 9.9 |
| Median read length | 6,863.0 |
| Median read quality | 10.8 |
| Number of reads | 1,147,254.0 |
| Read length N50 | 8,109.0 |
| STDEV read length | 3,166.2 |
| Total bases | 8,458,413,019.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1147254 (100.0%) 8458.4Mb |
| >Q7 | 1147251 (100.0%) 8458.4Mb |
| >Q10 | 754592 (65.8%) 5559.0Mb |
| >Q12 | 272790 (23.8%) 1992.2Mb |
| >Q15 | 232 (0.0%) 1.5Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 16.4 (3163) |
| 2 | 16.4 (5187) |
| 3 | 16.4 (6897) |
| 4 | 15.9 (4535) |
| 5 | 15.9 (2466) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 48352 (12.8) |
| 2 | 43659 (10.8) |
| 3 | 42740 (10.3) |
| 4 | 42078 (7.4) |
| 5 | 41078 (11.0) |