NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
7,396.9 |
| Mean read quality |
9.4 |
| Median read length |
6,512.0 |
| Median read quality |
10.2 |
| Number of reads |
511,642.0 |
| Read length N50 |
9,404.0 |
| STDEV read length |
4,505.5 |
| Total bases |
3,784,585,835.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
511642 (100.0%) 3784.6Mb |
| >Q7 |
511641 (100.0%) 3784.6Mb |
| >Q10 |
279469 (54.6%) 2060.4Mb |
| >Q12 |
60834 (11.9%) 424.3Mb |
| >Q15 |
22 (0.0%) 0.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
15.7 (3965) |
| 2 |
15.7 (9366) |
| 3 |
15.7 (2043) |
| 4 |
15.4 (2771) |
| 5 |
15.4 (7033) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
75068 (9.2) |
| 2 |
57976 (10.5) |
| 3 |
56698 (7.4) |
| 4 |
52459 (11.5) |
| 5 |
51605 (11.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot