NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 6,236.1 |
| Mean read quality | 11.6 |
| Median read length | 5,798.0 |
| Median read quality | 12.8 |
| Number of reads | 1,243,222.0 |
| Read length N50 | 7,389.0 |
| STDEV read length | 3,103.2 |
| Total bases | 7,752,900,090.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1243222 (100.0%) 7752.9Mb |
| >Q7 | 1243222 (100.0%) 7752.9Mb |
| >Q10 | 1083969 (87.2%) 6765.7Mb |
| >Q12 | 800674 (64.4%) 5009.3Mb |
| >Q15 | 146488 (11.8%) 880.6Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 20.9 (4107) |
| 2 | 20.8 (3823) |
| 3 | 20.6 (2414) |
| 4 | 20.6 (9509) |
| 5 | 20.5 (2526) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 162345 (7.9) |
| 2 | 42832 (9.4) |
| 3 | 40834 (7.9) |
| 4 | 39532 (8.6) |
| 5 | 38713 (8.2) |