NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 6,081.3 |
| Mean read quality | 11.5 |
| Median read length | 5,576.0 |
| Median read quality | 12.8 |
| Number of reads | 1,157,012.0 |
| Read length N50 | 7,274.0 |
| STDEV read length | 3,094.9 |
| Total bases | 7,036,109,167.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1157012 (100.0%) 7036.1Mb |
| >Q7 | 1157012 (100.0%) 7036.1Mb |
| >Q10 | 991289 (85.7%) 6007.7Mb |
| >Q12 | 728751 (63.0%) 4425.9Mb |
| >Q15 | 133194 (11.5%) 777.8Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 21.3 (2039) |
| 2 | 20.3 (4156) |
| 3 | 20.0 (2537) |
| 4 | 19.9 (4575) |
| 5 | 19.9 (2405) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 181685 (7.9) |
| 2 | 144645 (7.8) |
| 3 | 47077 (9.5) |
| 4 | 46074 (7.5) |
| 5 | 45280 (13.5) |