NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 7,686.4 |
| Mean read quality | 9.5 |
| Median read length | 7,818.0 |
| Median read quality | 10.3 |
| Number of reads | 1,027,280.0 |
| Read length N50 | 9,048.0 |
| STDEV read length | 3,714.5 |
| Total bases | 7,896,048,849.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1027280 (100.0%) 7896.0Mb |
| >Q7 | 1027280 (100.0%) 7896.0Mb |
| >Q10 | 593377 (57.8%) 4546.1Mb |
| >Q12 | 133036 (13.0%) 984.4Mb |
| >Q15 | 59 (0.0%) 0.3Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 16.0 (2207) |
| 2 | 15.8 (9799) |
| 3 | 15.8 (2245) |
| 4 | 15.7 (9183) |
| 5 | 15.6 (5083) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 55102 (8.9) |
| 2 | 54348 (11.0) |
| 3 | 53533 (9.6) |
| 4 | 52549 (8.1) |
| 5 | 49173 (11.0) |