NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 5,344.3 |
| Mean read quality | 9.6 |
| Median read length | 5,177.0 |
| Median read quality | 10.5 |
| Number of reads | 1,252,169.0 |
| Read length N50 | 6,157.0 |
| STDEV read length | 2,393.5 |
| Total bases | 6,691,974,082.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1252169 (100.0%) 6692.0Mb |
| >Q7 | 1252167 (100.0%) 6692.0Mb |
| >Q10 | 755874 (60.4%) 4021.1Mb |
| >Q12 | 234629 (18.7%) 1223.6Mb |
| >Q15 | 429 (0.0%) 1.8Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 16.5 (2378) |
| 2 | 16.4 (11093) |
| 3 | 16.4 (3031) |
| 4 | 16.4 (5932) |
| 5 | 16.2 (7250) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 50461 (8.7) |
| 2 | 40678 (8.8) |
| 3 | 39005 (9.7) |
| 4 | 34766 (11.1) |
| 5 | 34101 (9.6) |