NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 5,636.0 |
| Mean read quality | 10.9 |
| Median read length | 4,213.0 |
| Median read quality | 12.2 |
| Number of reads | 1,065,614.0 |
| Read length N50 | 7,225.0 |
| STDEV read length | 3,981.7 |
| Total bases | 6,005,828,782.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1065614 (100.0%) 6005.8Mb |
| >Q7 | 1065614 (100.0%) 6005.8Mb |
| >Q10 | 829689 (77.9%) 4654.2Mb |
| >Q12 | 557899 (52.4%) 3107.3Mb |
| >Q15 | 142804 (13.4%) 755.3Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 21.8 (3187) |
| 2 | 20.9 (5962) |
| 3 | 20.7 (2441) |
| 4 | 20.7 (10097) |
| 5 | 20.7 (6818) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 62643 (12.8) |
| 2 | 60222 (8.4) |
| 3 | 59725 (13.5) |
| 4 | 59478 (8.5) |
| 5 | 57313 (7.8) |