NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 5,823.1 |
| Mean read quality | 9.6 |
| Median read length | 4,994.0 |
| Median read quality | 10.5 |
| Number of reads | 1,337,813.0 |
| Read length N50 | 7,166.0 |
| STDEV read length | 3,362.7 |
| Total bases | 7,790,232,498.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1337813 (100.0%) 7790.2Mb |
| >Q7 | 1337810 (100.0%) 7790.2Mb |
| >Q10 | 807970 (60.4%) 4644.4Mb |
| >Q12 | 192771 (14.4%) 1068.9Mb |
| >Q15 | 74 (0.0%) 0.3Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 16.7 (3866) |
| 2 | 16.6 (2326) |
| 3 | 16.1 (2041) |
| 4 | 15.7 (2067) |
| 5 | 15.7 (3060) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 187414 (8.8) |
| 2 | 121033 (9.1) |
| 3 | 94711 (9.6) |
| 4 | 75025 (9.4) |
| 5 | 74696 (8.7) |