NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
188.4 |
| Mean read quality |
8.4 |
| Median read length |
171.0 |
| Median read quality |
8.9 |
| Number of reads |
36.0 |
| Read length N50 |
215.0 |
| STDEV read length |
97.9 |
| Total bases |
6,783.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
36 (100.0%) 0.0Mb |
| >Q7 |
36 (100.0%) 0.0Mb |
| >Q10 |
8 (22.2%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
11.5 (367) |
| 2 |
11.2 (123) |
| 3 |
11.1 (215) |
| 4 |
10.9 (83) |
| 5 |
10.8 (146) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
554 (9.3) |
| 2 |
383 (8.3) |
| 3 |
367 (11.5) |
| 4 |
282 (8.8) |
| 5 |
277 (8.8) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot