NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 996.6 |
| Mean read quality | 5.9 |
| Median read length | 578.0 |
| Median read quality | 7.4 |
| Number of reads | 12,963,687.0 |
| Read length N50 | 1,746.0 |
| STDEV read length | 1,268.7 |
| Total bases | 12,919,446,896.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 10708702 (82.6%) 12119.6Mb |
| >Q7 | 7412080 (57.2%) 9185.8Mb |
| >Q10 | 453112 (3.5%) 530.8Mb |
| >Q12 | 2820 (0.0%) 1.7Mb |
| >Q15 | 1 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 15.0 (199) |
| 2 | 14.4 (173) |
| 3 | 14.4 (242) |
| 4 | 14.3 (686) |
| 5 | 14.2 (824) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 77545 (2.6) |
| 2 | 69667 (8.9) |
| 3 | 58177 (10.4) |
| 4 | 58094 (2.9) |
| 5 | 53689 (9.0) |