NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,488.8 |
| Mean read quality | 7.8 |
| Median read length | 726.0 |
| Median read quality | 9.3 |
| Number of reads | 12,273,308.0 |
| Read length N50 | 3,005.0 |
| STDEV read length | 2,190.6 |
| Total bases | 18,272,611,977.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 11479066 (93.5%) 17680.6Mb |
| >Q7 | 10398826 (84.7%) 16500.2Mb |
| >Q10 | 3945699 (32.1%) 7372.3Mb |
| >Q12 | 66442 (0.5%) 66.2Mb |
| >Q15 | 0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 14.9 (220) |
| 2 | 14.8 (423) |
| 3 | 14.7 (270) |
| 4 | 14.6 (490) |
| 5 | 14.6 (241) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 112812 (9.8) |
| 2 | 102605 (10.3) |
| 3 | 91460 (7.3) |
| 4 | 89836 (10.6) |
| 5 | 89622 (9.0) |