NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,561.9 |
| Mean read quality | 7.6 |
| Median read length | 936.0 |
| Median read quality | 9.2 |
| Number of reads | 10,199,078.0 |
| Read length N50 | 2,771.0 |
| STDEV read length | 1,828.9 |
| Total bases | 15,929,592,334.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 9422595 (92.4%) 15303.6Mb |
| >Q7 | 8357524 (81.9%) 13984.0Mb |
| >Q10 | 3118948 (30.6%) 5960.2Mb |
| >Q12 | 66888 (0.7%) 97.8Mb |
| >Q15 | 0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 14.9 (2578) |
| 2 | 14.8 (621) |
| 3 | 14.5 (220) |
| 4 | 14.4 (668) |
| 5 | 14.4 (836) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 90051 (8.8) |
| 2 | 82617 (11.3) |
| 3 | 77395 (10.4) |
| 4 | 71356 (10.3) |
| 5 | 67835 (9.6) |