NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,137.7 |
| Mean read quality | 7.4 |
| Median read length | 781.0 |
| Median read quality | 8.9 |
| Number of reads | 19,186,744.0 |
| Read length N50 | 1,638.0 |
| STDEV read length | 1,192.4 |
| Total bases | 21,828,866,097.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 17599503 (91.7%) 20965.0Mb |
| >Q7 | 15306475 (79.8%) 18822.3Mb |
| >Q10 | 4533893 (23.6%) 6200.8Mb |
| >Q12 | 68741 (0.4%) 68.4Mb |
| >Q15 | 1 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 15.8 (727) |
| 2 | 15.0 (243) |
| 3 | 15.0 (667) |
| 4 | 14.6 (236) |
| 5 | 14.4 (528) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 88094 (10.4) |
| 2 | 74062 (10.0) |
| 3 | 68878 (8.4) |
| 4 | 65994 (8.5) |
| 5 | 65261 (3.0) |