NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 1,800.2 |
| Mean read quality | 9.3 |
| Median read length | 1,048.0 |
| Median read quality | 10.1 |
| Number of reads | 3,404,101.0 |
| Read length N50 | 3,030.0 |
| STDEV read length | 2,314.8 |
| Total bases | 6,127,970,421.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 3404101 (100.0%) 6128.0Mb |
| >Q7 | 3401379 (99.9%) 6124.9Mb |
| >Q10 | 1824228 (53.6%) 3686.9Mb |
| >Q12 | 59817 (1.8%) 96.3Mb |
| >Q15 | 0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 14.1 (234) |
| 2 | 13.9 (390) |
| 3 | 13.9 (454) |
| 4 | 13.9 (441) |
| 5 | 13.8 (427) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 115448 (10.2) |
| 2 | 102782 (9.3) |
| 3 | 98194 (11.9) |
| 4 | 97518 (11.3) |
| 5 | 93289 (11.4) |