NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
57.2 |
| Mean read quality |
18.7 |
| Median read length |
61.5 |
| Median read quality |
24.0 |
| Number of reads |
16.0 |
| Read length N50 |
65.0 |
| STDEV read length |
13.9 |
| Total bases |
915.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
16 (100.0%) 0.0Mb |
| >Q7 |
16 (100.0%) 0.0Mb |
| >Q10 |
16 (100.0%) 0.0Mb |
| >Q12 |
16 (100.0%) 0.0Mb |
| >Q15 |
14 (87.5%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
39.7 (31) |
| 2 |
38.1 (70) |
| 3 |
35.7 (44) |
| 4 |
34.0 (62) |
| 5 |
33.1 (58) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
80 (27.6) |
| 2 |
70 (38.1) |
| 3 |
68 (13.9) |
| 4 |
68 (24.7) |
| 5 |
65 (23.2) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot