NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
53.8 |
| Mean read quality |
18.2 |
| Median read length |
54.0 |
| Median read quality |
22.5 |
| Number of reads |
180.0 |
| Read length N50 |
55.0 |
| STDEV read length |
8.4 |
| Total bases |
9,681.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
180 (100.0%) 0.0Mb |
| >Q7 |
180 (100.0%) 0.0Mb |
| >Q10 |
179 (99.4%) 0.0Mb |
| >Q12 |
175 (97.2%) 0.0Mb |
| >Q15 |
155 (86.1%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
41.3 (37) |
| 2 |
40.0 (51) |
| 3 |
38.8 (64) |
| 4 |
37.8 (47) |
| 5 |
37.5 (57) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
82 (29.8) |
| 2 |
71 (20.5) |
| 3 |
71 (14.3) |
| 4 |
70 (13.8) |
| 5 |
70 (16.4) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot