NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
82.0 |
| Mean read quality |
19.7 |
| Median read length |
65.0 |
| Median read quality |
23.6 |
| Number of reads |
69.0 |
| Read length N50 |
95.0 |
| STDEV read length |
52.4 |
| Total bases |
5,657.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
69 (100.0%) 0.0Mb |
| >Q7 |
69 (100.0%) 0.0Mb |
| >Q10 |
68 (98.6%) 0.0Mb |
| >Q12 |
68 (98.6%) 0.0Mb |
| >Q15 |
65 (94.2%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
37.3 (90) |
| 2 |
36.7 (47) |
| 3 |
36.1 (93) |
| 4 |
36.1 (28) |
| 5 |
36.1 (109) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
298 (18.5) |
| 2 |
247 (22.1) |
| 3 |
236 (22.3) |
| 4 |
218 (21.7) |
| 5 |
152 (17.9) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot