NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
61.7 |
| Mean read quality |
20.3 |
| Median read length |
53.0 |
| Median read quality |
26.9 |
| Number of reads |
251.0 |
| Read length N50 |
59.0 |
| STDEV read length |
43.8 |
| Total bases |
15,485.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
251 (100.0%) 0.0Mb |
| >Q7 |
251 (100.0%) 0.0Mb |
| >Q10 |
251 (100.0%) 0.0Mb |
| >Q12 |
249 (99.2%) 0.0Mb |
| >Q15 |
239 (95.2%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
41.0 (26) |
| 2 |
40.5 (59) |
| 3 |
40.2 (31) |
| 4 |
39.2 (41) |
| 5 |
38.8 (45) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
525 (10.7) |
| 2 |
291 (21.6) |
| 3 |
283 (24.3) |
| 4 |
189 (35.4) |
| 5 |
175 (21.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot