NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
52.7 |
| Mean read quality |
20.2 |
| Median read length |
53.0 |
| Median read quality |
21.9 |
| Number of reads |
6.0 |
| Read length N50 |
57.0 |
| STDEV read length |
14.5 |
| Total bases |
316.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
6 (100.0%) 0.0Mb |
| >Q7 |
6 (100.0%) 0.0Mb |
| >Q10 |
6 (100.0%) 0.0Mb |
| >Q12 |
6 (100.0%) 0.0Mb |
| >Q15 |
6 (100.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
32.0 (31) |
| 2 |
31.0 (57) |
| 3 |
23.4 (43) |
| 4 |
20.4 (78) |
| 5 |
18.8 (58) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
78 (20.4) |
| 2 |
58 (18.8) |
| 3 |
57 (31.0) |
| 4 |
49 (16.8) |
| 5 |
43 (23.4) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot