NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
100.5 |
| Mean read quality |
21.3 |
| Median read length |
75.0 |
| Median read quality |
28.4 |
| Number of reads |
899.0 |
| Read length N50 |
115.0 |
| STDEV read length |
73.5 |
| Total bases |
90,370.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
899 (100.0%) 0.1Mb |
| >Q7 |
899 (100.0%) 0.1Mb |
| >Q10 |
899 (100.0%) 0.1Mb |
| >Q12 |
896 (99.7%) 0.1Mb |
| >Q15 |
855 (95.1%) 0.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
43.2 (55) |
| 2 |
42.9 (70) |
| 3 |
42.5 (78) |
| 4 |
42.2 (38) |
| 5 |
42.2 (56) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
648 (18.8) |
| 2 |
568 (31.7) |
| 3 |
545 (32.8) |
| 4 |
516 (21.2) |
| 5 |
481 (20.4) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot