NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
80.8 |
| Mean read quality |
19.2 |
| Median read length |
61.0 |
| Median read quality |
26.6 |
| Number of reads |
288.0 |
| Read length N50 |
80.0 |
| STDEV read length |
66.9 |
| Total bases |
23,260.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
288 (100.0%) 0.0Mb |
| >Q7 |
288 (100.0%) 0.0Mb |
| >Q10 |
285 (99.0%) 0.0Mb |
| >Q12 |
280 (97.2%) 0.0Mb |
| >Q15 |
257 (89.2%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
42.1 (65) |
| 2 |
41.5 (52) |
| 3 |
40.7 (71) |
| 4 |
40.4 (41) |
| 5 |
40.1 (60) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
654 (21.2) |
| 2 |
535 (20.0) |
| 3 |
533 (30.5) |
| 4 |
276 (28.3) |
| 5 |
257 (12.3) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot