NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
50.9 |
| Mean read quality |
17.5 |
| Median read length |
55.0 |
| Median read quality |
32.0 |
| Number of reads |
9.0 |
| Read length N50 |
55.0 |
| STDEV read length |
8.5 |
| Total bases |
458.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
9 (100.0%) 0.0Mb |
| >Q7 |
9 (100.0%) 0.0Mb |
| >Q10 |
8 (88.9%) 0.0Mb |
| >Q12 |
8 (88.9%) 0.0Mb |
| >Q15 |
8 (88.9%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
36.7 (56) |
| 2 |
36.3 (48) |
| 3 |
34.5 (55) |
| 4 |
32.5 (55) |
| 5 |
32.0 (36) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
62 (19.6) |
| 2 |
58 (17.5) |
| 3 |
56 (36.7) |
| 4 |
55 (34.5) |
| 5 |
55 (32.5) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot