NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
63.9 |
| Mean read quality |
19.8 |
| Median read length |
58.0 |
| Median read quality |
25.9 |
| Number of reads |
188.0 |
| Read length N50 |
64.0 |
| STDEV read length |
39.9 |
| Total bases |
12,015.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
188 (100.0%) 0.0Mb |
| >Q7 |
188 (100.0%) 0.0Mb |
| >Q10 |
187 (99.5%) 0.0Mb |
| >Q12 |
185 (98.4%) 0.0Mb |
| >Q15 |
169 (89.9%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
43.7 (34) |
| 2 |
42.0 (56) |
| 3 |
41.8 (38) |
| 4 |
41.8 (39) |
| 5 |
41.4 (53) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
351 (29.6) |
| 2 |
309 (18.3) |
| 3 |
238 (26.1) |
| 4 |
225 (14.5) |
| 5 |
175 (17.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot