NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
77.3 |
| Mean read quality |
18.7 |
| Median read length |
57.5 |
| Median read quality |
23.2 |
| Number of reads |
174.0 |
| Read length N50 |
77.0 |
| STDEV read length |
73.6 |
| Total bases |
13,442.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
174 (100.0%) 0.0Mb |
| >Q7 |
174 (100.0%) 0.0Mb |
| >Q10 |
173 (99.4%) 0.0Mb |
| >Q12 |
169 (97.1%) 0.0Mb |
| >Q15 |
155 (89.1%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
42.8 (51) |
| 2 |
41.3 (56) |
| 3 |
40.8 (41) |
| 4 |
40.6 (36) |
| 5 |
40.4 (60) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
694 (27.3) |
| 2 |
476 (15.4) |
| 3 |
315 (21.5) |
| 4 |
302 (17.0) |
| 5 |
264 (13.5) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot