NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 6,818.0 |
| Mean read quality | 10.4 |
| Median read length | 5,477.0 |
| Median read quality | 11.2 |
| Number of reads | 1,151,348.0 |
| Read length N50 | 11,189.0 |
| STDEV read length | 5,902.7 |
| Total bases | 7,849,840,526.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1151348 (100.0%) 7849.8Mb |
| >Q7 | 1151348 (100.0%) 7849.8Mb |
| >Q10 | 839279 (72.9%) 5762.0Mb |
| >Q12 | 397860 (34.6%) 2691.7Mb |
| >Q15 | 11282 (1.0%) 42.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 19.3 (653) |
| 2 | 19.0 (268) |
| 3 | 19.0 (290) |
| 4 | 18.9 (319) |
| 5 | 18.8 (540) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 185025 (9.9) |
| 2 | 141721 (8.5) |
| 3 | 97222 (10.1) |
| 4 | 67483 (14.3) |
| 5 | 65986 (8.5) |