NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,560.9 |
| Mean read quality |
12.2 |
| Median read length |
1,690.0 |
| Median read quality |
13.2 |
| Number of reads |
12.0 |
| Read length N50 |
2,237.0 |
| STDEV read length |
965.7 |
| Total bases |
18,731.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
12 (100.0%) 0.0Mb |
| >Q7 |
12 (100.0%) 0.0Mb |
| >Q10 |
12 (100.0%) 0.0Mb |
| >Q12 |
8 (66.7%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
14.6 (2828) |
| 2 |
14.3 (1616) |
| 3 |
14.3 (3187) |
| 4 |
13.7 (1764) |
| 5 |
13.5 (1582) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
3187 (14.3) |
| 2 |
2828 (14.6) |
| 3 |
2290 (11.0) |
| 4 |
2237 (12.0) |
| 5 |
1812 (11.1) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot