NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
855.2 |
| Mean read quality |
11.3 |
| Median read length |
323.0 |
| Median read quality |
11.5 |
| Number of reads |
13.0 |
| Read length N50 |
1,513.0 |
| STDEV read length |
821.4 |
| Total bases |
11,118.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
13 (100.0%) 0.0Mb |
| >Q7 |
13 (100.0%) 0.0Mb |
| >Q10 |
13 (100.0%) 0.0Mb |
| >Q12 |
5 (38.5%) 0.0Mb |
| >Q15 |
1 (7.7%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
15.1 (2965) |
| 2 |
13.8 (276) |
| 3 |
13.7 (1872) |
| 4 |
12.8 (1513) |
| 5 |
12.5 (1246) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2965 (15.1) |
| 2 |
1872 (13.7) |
| 3 |
1513 (12.8) |
| 4 |
1246 (12.5) |
| 5 |
1209 (11.3) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot