NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,314.3 |
| Mean read quality |
12.2 |
| Median read length |
1,327.0 |
| Median read quality |
13.2 |
| Number of reads |
182.0 |
| Read length N50 |
1,492.0 |
| STDEV read length |
488.6 |
| Total bases |
239,209.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
182 (100.0%) 0.2Mb |
| >Q7 |
182 (100.0%) 0.2Mb |
| >Q10 |
176 (96.7%) 0.2Mb |
| >Q12 |
137 (75.3%) 0.2Mb |
| >Q15 |
17 (9.3%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
17.9 (1074) |
| 2 |
16.5 (1371) |
| 3 |
16.3 (755) |
| 4 |
16.0 (1950) |
| 5 |
15.9 (1167) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2606 (11.0) |
| 2 |
2582 (14.2) |
| 3 |
2474 (13.6) |
| 4 |
2426 (13.7) |
| 5 |
2426 (11.6) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot