NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
3,294.0 |
| Mean read quality |
10.5 |
| Median read length |
2,242.0 |
| Median read quality |
11.3 |
| Number of reads |
3.0 |
| Read length N50 |
5,417.0 |
| STDEV read length |
1,501.2 |
| Total bases |
9,882.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
3 (100.0%) 0.0Mb |
| >Q7 |
3 (100.0%) 0.0Mb |
| >Q10 |
2 (66.7%) 0.0Mb |
| >Q12 |
1 (33.3%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
12.8 (5417) |
| 2 |
11.3 (2223) |
| 3 |
9.4 (2242) |
| 4 |
NA |
| 5 |
NA |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
5417 (12.8) |
| 2 |
2242 (9.4) |
| 3 |
2223 (11.3) |
| 4 |
NA |
| 5 |
NA |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot