NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
2,931.2 |
| Mean read quality |
10.9 |
| Median read length |
2,590.5 |
| Median read quality |
11.2 |
| Number of reads |
16.0 |
| Read length N50 |
5,033.0 |
| STDEV read length |
2,005.6 |
| Total bases |
46,900.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
16 (100.0%) 0.0Mb |
| >Q7 |
16 (100.0%) 0.0Mb |
| >Q10 |
14 (87.5%) 0.0Mb |
| >Q12 |
6 (37.5%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
14.2 (5091) |
| 2 |
13.7 (4240) |
| 3 |
13.7 (2854) |
| 4 |
12.4 (3041) |
| 5 |
12.3 (1295) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
6909 (10.8) |
| 2 |
6455 (10.2) |
| 3 |
5091 (14.2) |
| 4 |
5033 (11.2) |
| 5 |
4240 (13.7) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot