NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
2,814.3 |
| Mean read quality |
10.5 |
| Median read length |
2,748.5 |
| Median read quality |
11.4 |
| Number of reads |
40.0 |
| Read length N50 |
3,079.0 |
| STDEV read length |
1,019.3 |
| Total bases |
112,574.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
40 (100.0%) 0.1Mb |
| >Q7 |
40 (100.0%) 0.1Mb |
| >Q10 |
34 (85.0%) 0.1Mb |
| >Q12 |
10 (25.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
13.3 (1214) |
| 2 |
13.3 (1828) |
| 3 |
13.3 (3459) |
| 4 |
13.1 (2690) |
| 5 |
13.1 (2194) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
4921 (10.6) |
| 2 |
4784 (11.0) |
| 3 |
4733 (12.1) |
| 4 |
4367 (10.4) |
| 5 |
4086 (11.5) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot