NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,422.0 |
| Mean read quality | 11.4 |
| Median read length | 3,381.0 |
| Median read quality | 12.6 |
| Number of reads | 1,054,896.0 |
| Read length N50 | 3,783.0 |
| STDEV read length | 1,248.7 |
| Total bases | 3,609,824,341.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1054892 (100.0%) 3609.8Mb |
| >Q7 | 1054715 (100.0%) 3609.7Mb |
| >Q10 | 927906 (88.0%) 3200.8Mb |
| >Q12 | 650050 (61.6%) 2282.2Mb |
| >Q15 | 30906 (2.9%) 109.4Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 20.8 (373) |
| 2 | 19.2 (766) |
| 3 | 18.9 (178) |
| 4 | 18.9 (273) |
| 5 | 18.9 (323) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 12026 (8.7) |
| 2 | 11704 (8.3) |
| 3 | 11446 (10.2) |
| 4 | 11071 (9.0) |
| 5 | 10814 (13.7) |