NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 2,916.7 |
| Mean read quality | 11.6 |
| Median read length | 2,837.0 |
| Median read quality | 12.9 |
| Number of reads | 1,310,249.0 |
| Read length N50 | 3,119.0 |
| STDEV read length | 962.7 |
| Total bases | 3,821,628,038.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1310249 (100.0%) 3821.6Mb |
| >Q7 | 1310249 (100.0%) 3821.6Mb |
| >Q10 | 1155604 (88.2%) 3394.3Mb |
| >Q12 | 855914 (65.3%) 2533.8Mb |
| >Q15 | 128843 (9.8%) 390.3Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 20.0 (159) |
| 2 | 18.9 (4063) |
| 3 | 18.6 (4023) |
| 4 | 18.5 (1858) |
| 5 | 18.5 (1992) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 16077 (14.1) |
| 2 | 13458 (12.8) |
| 3 | 12975 (13.5) |
| 4 | 12784 (15.0) |
| 5 | 12110 (13.2) |