NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
246.1 |
| Mean read quality |
7.6 |
| Median read length |
150.0 |
| Median read quality |
7.9 |
| Number of reads |
70.0 |
| Read length N50 |
173.0 |
| STDEV read length |
451.7 |
| Total bases |
17,230.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
70 (100.0%) 0.0Mb |
| >Q7 |
70 (100.0%) 0.0Mb |
| >Q10 |
3 (4.3%) 0.0Mb |
| >Q12 |
2 (2.9%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
12.1 (2760) |
| 2 |
12.1 (1786) |
| 3 |
10.6 (2474) |
| 4 |
9.7 (218) |
| 5 |
9.7 (153) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2760 (12.1) |
| 2 |
2474 (10.6) |
| 3 |
1786 (12.1) |
| 4 |
262 (7.5) |
| 5 |
218 (9.7) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot