NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,187.0 |
| Mean read quality | 11.6 |
| Median read length | 3,147.0 |
| Median read quality | 12.9 |
| Number of reads | 1,191,649.0 |
| Read length N50 | 3,452.0 |
| STDEV read length | 1,013.7 |
| Total bases | 3,797,751,201.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1191649 (100.0%) 3797.8Mb |
| >Q7 | 1188758 (99.8%) 3790.5Mb |
| >Q10 | 1072135 (90.0%) 3457.5Mb |
| >Q12 | 821333 (68.9%) 2685.4Mb |
| >Q15 | 24702 (2.1%) 82.5Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 18.2 (361) |
| 2 | 18.1 (151) |
| 3 | 17.7 (2221) |
| 4 | 17.6 (2391) |
| 5 | 17.5 (3686) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 10461 (12.9) |
| 2 | 10232 (6.9) |
| 3 | 9923 (12.3) |
| 4 | 9428 (9.7) |
| 5 | 9380 (10.8) |