NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,336.4 |
| Mean read quality | 11.2 |
| Median read length | 3,313.0 |
| Median read quality | 12.4 |
| Number of reads | 1,667,686.0 |
| Read length N50 | 3,573.0 |
| STDEV read length | 997.9 |
| Total bases | 5,564,146,077.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1667686 (100.0%) 5564.1Mb |
| >Q7 | 1665423 (99.9%) 5557.6Mb |
| >Q10 | 1448481 (86.9%) 4877.1Mb |
| >Q12 | 981685 (58.9%) 3347.3Mb |
| >Q15 | 12010 (0.7%) 40.2Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 18.8 (365) |
| 2 | 18.3 (181) |
| 3 | 18.0 (246) |
| 4 | 17.8 (211) |
| 5 | 17.4 (433) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 45663 (12.2) |
| 2 | 42671 (10.8) |
| 3 | 34330 (11.5) |
| 4 | 30160 (9.6) |
| 5 | 27584 (11.8) |