NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,195.0 |
| Mean read quality | 12.2 |
| Median read length | 3,168.0 |
| Median read quality | 13.5 |
| Number of reads | 1,017,769.0 |
| Read length N50 | 3,466.0 |
| STDEV read length | 1,018.1 |
| Total bases | 3,251,732,690.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1017769 (100.0%) 3251.7Mb |
| >Q7 | 1015841 (99.8%) 3247.0Mb |
| >Q10 | 943266 (92.7%) 3042.7Mb |
| >Q12 | 776067 (76.3%) 2534.7Mb |
| >Q15 | 153498 (15.1%) 521.1Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 18.8 (316) |
| 2 | 18.6 (836) |
| 3 | 18.5 (246) |
| 4 | 18.4 (3431) |
| 5 | 18.2 (418) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 10652 (9.2) |
| 2 | 10428 (8.4) |
| 3 | 10418 (13.8) |
| 4 | 10014 (11.1) |
| 5 | 9852 (11.9) |