NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,180.5 |
| Mean read quality | 11.3 |
| Median read length | 3,202.0 |
| Median read quality | 12.3 |
| Number of reads | 1,739,475.0 |
| Read length N50 | 3,221.0 |
| STDEV read length | 1,019.2 |
| Total bases | 5,532,460,287.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1739464 (100.0%) 5532.4Mb |
| >Q7 | 1737247 (99.9%) 5527.1Mb |
| >Q10 | 1550390 (89.1%) 5005.5Mb |
| >Q12 | 969577 (55.7%) 3231.9Mb |
| >Q15 | 21957 (1.3%) 74.2Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 19.5 (264) |
| 2 | 18.9 (159) |
| 3 | 18.4 (194) |
| 4 | 18.1 (678) |
| 5 | 18.0 (246) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 12189 (11.7) |
| 2 | 12091 (11.2) |
| 3 | 11717 (9.6) |
| 4 | 11684 (12.4) |
| 5 | 11242 (11.5) |