NanoPlot reports
Summary statistics
| General summary | |
|---|---|
| Mean read length | 3,665.2 |
| Mean read quality | 10.9 |
| Median read length | 3,762.0 |
| Median read quality | 12.0 |
| Number of reads | 1,375,559.0 |
| Read length N50 | 4,215.0 |
| STDEV read length | 1,477.9 |
| Total bases | 5,041,739,962.0 |
| Number, percentage and megabases of reads above quality cutoffs | |
| >Q5 | 1375559 (100.0%) 5041.7Mb |
| >Q7 | 1375559 (100.0%) 5041.7Mb |
| >Q10 | 1142631 (83.1%) 4244.8Mb |
| >Q12 | 698282 (50.8%) 2649.1Mb |
| >Q15 | 8413 (0.6%) 32.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths | |
| 1 | 17.8 (204) |
| 2 | 17.4 (287) |
| 3 | 17.1 (4558) |
| 4 | 16.9 (3220) |
| 5 | 16.8 (4334) |
| Top 5 longest reads and their mean basecall quality score | |
| 1 | 21053 (10.9) |
| 2 | 18953 (10.0) |
| 3 | 16552 (11.6) |
| 4 | 16219 (13.2) |
| 5 | 16198 (10.0) |