NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,790.7 |
| Mean read quality |
9.8 |
| Median read length |
1,117.0 |
| Median read quality |
9.7 |
| Number of reads |
10.0 |
| Read length N50 |
4,302.0 |
| STDEV read length |
1,749.4 |
| Total bases |
17,907.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
10 (100.0%) 0.0Mb |
| >Q7 |
10 (100.0%) 0.0Mb |
| >Q10 |
4 (40.0%) 0.0Mb |
| >Q12 |
4 (40.0%) 0.0Mb |
| >Q15 |
1 (10.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
15.2 (5302) |
| 2 |
13.6 (2657) |
| 3 |
13.5 (2354) |
| 4 |
13.5 (1679) |
| 5 |
9.8 (555) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
5302 (15.2) |
| 2 |
4302 (9.2) |
| 3 |
2657 (13.6) |
| 4 |
2354 (13.5) |
| 5 |
1679 (13.5) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot