NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
1,026.7 |
| Mean read quality |
8.1 |
| Median read length |
746.0 |
| Median read quality |
8.6 |
| Number of reads |
14.0 |
| Read length N50 |
1,032.0 |
| STDEV read length |
783.7 |
| Total bases |
14,374.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
14 (100.0%) 0.0Mb |
| >Q7 |
14 (100.0%) 0.0Mb |
| >Q10 |
1 (7.1%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
10.1 (714) |
| 2 |
10.0 (1093) |
| 3 |
9.9 (731) |
| 4 |
9.8 (1923) |
| 5 |
8.9 (502) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
3536 (8.0) |
| 2 |
1923 (9.8) |
| 3 |
1093 (10.0) |
| 4 |
1032 (8.3) |
| 5 |
992 (8.5) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot