NanoPlot statistics report
NanoPlot reports
Summary statistics
| General summary |
|
| Mean read length |
831.1 |
| Mean read quality |
8.5 |
| Median read length |
665.0 |
| Median read quality |
9.3 |
| Number of reads |
14.0 |
| Read length N50 |
865.0 |
| STDEV read length |
403.3 |
| Total bases |
11,636.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q5 |
14 (100.0%) 0.0Mb |
| >Q7 |
14 (100.0%) 0.0Mb |
| >Q10 |
0 (0.0%) 0.0Mb |
| >Q12 |
0 (0.0%) 0.0Mb |
| >Q15 |
0 (0.0%) 0.0Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
10.0 (785) |
| 2 |
9.9 (651) |
| 3 |
9.8 (516) |
| 4 |
9.8 (1200) |
| 5 |
9.7 (519) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
2099 (8.5) |
| 2 |
1200 (9.8) |
| 3 |
1037 (9.4) |
| 4 |
906 (8.5) |
| 5 |
865 (9.0) |
Plots
Weighted histogram of read lengths
Non weighted histogram of read lengths
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality kde plot